rfhg_67943.1

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Basic information about the TSS


TSS ID:rfhg_67943.1
Species:human
Chr:chr5
Start:59039455
End:59039500
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3707006,EH38E2375106)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001197222.2:0
NM_001197221.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000358923.10:-12
  • AF012074:-12
  • ENST00000515011.5:-15
  • U79571:-15
  • U50157:345
  • U50158:345
  • AJ250852:484
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-1
Nearest PromoterID:NM_001197222
Entrez ID:5144
Nearest Unigene:Hs.117545
Nearest Refseq:NM_006203
Nearest Ensembl:ENSG00000113448
Gene Name:
Gene Alias:ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1
Gene Type:protein-coding
CpG%:0.088889
GC%:0.608696
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):