rfhg_68269.1

Basic information about the TSS

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TSS ID: rfhg_68269.1 TSS ID(Version3): hg_61955.1 Species: human Chr: chr5		Start: 65624289 End: 65624368 Strand: -
Source datasets	FANTOM5|EPD|DRA000914|PRJNA401781|PRJNA615891|PRJNA548673 |PRJDB5282|PRJNA4843412|DRA013844
Protocol	CAGE|TSS_database|RAMPAGE|TIF-seq2|oligo_capping |ReCappable-seq|SLIC_CAGE|C1CAGE|NETCAGE
TSS cluster detected*	13

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3711602,EH38E2377932)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000231524.14:0 ENST00000381018.7:0 ENST00000274327.11:0 ENST00000506400.1:0 ENST00000505205.1:0 BC022510:0 AF230397:0 AF230398:0 AF230399:0 L04510:0 AK292814:0 GeneID: 373 HGNC/MGI_ID: HGNC:660 UniProt_ID: A8K9U9 D6RBN4 D6RD22 P36406 Nearer transcript ids and distances: KJ890698:14 DQ893646:15 DQ895584:15 AB384982:15 CU692664:15 LF209895:-24 MA445472:-24 LP895528:-248 LF332494:395 MA568071:395 view more...

Gene_name: tripartite motif containing 23 Gene_symbol: TRIM23 Gene_synonyms: ARD1 RNF46 Gene_source: HGNC:660

TATA-Box annotation

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Distance to TSS:	5
Nearest PromoterID:	NM_033227
Entrez ID:	373
Nearest Unigene:	Hs.792
Nearest Refseq:	NM_001656
Nearest Ensembl:	ENSG00000113595
Gene Name:	tripartite motif containing 23
Gene Alias:	ARD1|ARFD1|RNF46
Gene Type:	protein-coding
CpG%:	0.050633
GC%:	0.637500
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.