rfhg_68546.1

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Basic information about the TSS


TSS ID:rfhg_68546.1
TSS ID(Version3):hg_241388.1
Species:human
Chr:chr5
Start:69560188
End:69560257
Strand:+
Source datasetsEPD|DRA000914|PRJNA4843412|DRA013844|PRJDB5282|PRJNA401781
|PRJNA548673|PRJNA615891|PRJNA597322
ProtocolTSS_database|CAGE|NETCAGE|C1CAGE|ReCappable-seq|SLIC_CAGE
|STRIPE-seq|RAMPAGE|TIF-seq2|oligo_capping
TSS cluster detected*13

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000380729.8:0
ENST00000512736.5:0
ENST00000514069.6:0
ENST00000511629.6:0
ENST00000502619.5:0
ENST00000506129.5:0
ENST00000510979.5:0
ENST00000514162.5:0
GeneID:728340
HGNC/MGI_ID:HGNC:31394
UniProt_ID:D6RAW1 D6RGC9 D6RIT7 D6RJD3 Q6P1K8
Nearer transcript ids and distances:
  • ENST00000505737.2:2
  • ENST00000446221.6:37
view more...
Gene_name:GTF2H2 family member C
Gene_symbol:GTF2H2C
Gene_synonyms:
Gene_source:HGNC:31394



TATA-Box annotation


Distance to TSS:-1
Nearest PromoterID:NR_033417
Entrez ID:653238
Nearest Unigene:Hs.607501
Nearest Refseq:NM_001098729
Nearest Ensembl:
Gene Name:GTF2H2 family member C
Gene Alias:-
Gene Type:pseudo
CpG%:0.115942
GC%:0.671429
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.