rfhg_73108.1

Basic information about the TSS

TSS ID:	rfhg_73108.1
Species:	human
Chr:	chr5

Start:	140821599
End:	140821633
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D3767754,EH38E2414486)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000614258.1:0 ENST00000529859.2:0
GeneID:	56143
HGNC/MGI_ID:	HGNC:8671
UniProt_ID:	Q9Y5H7
Nearer transcript ids and distances:	ENST00000529619.5:4 BC033735:4 AF152483:143 AF152313:143 view more...

Gene_name:	protocadherin alpha 5
Gene_symbol:	PCDHA5
Gene_synonyms:	CNR6 CNRN6 CRNR6 PCDH-ALPHA5
Gene_source:	HGNC:8671

TATA-Box annotation

Distance to TSS:	3
Nearest PromoterID:	NM_018908
Entrez ID:	56143
Nearest Unigene:	Hs.199343
Nearest Refseq:	NM_018908
Nearest Ensembl:	ENSG00000204965
Gene Name:	protocadherin alpha 5
Gene Alias:	CNR6\|CNRN6\|CNRS6\|CRNR6\|PCDH-ALPHA5
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.371429
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.