rfhg_7406.1

Basic information about the TSS

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TSS ID: rfhg_7406.1 TSS ID(Version3): hg_12608.1 Species: human Chr: chr1		Start: 61725092 End: 61725180 Strand: -
Source datasets	FANTOM5|DBTSS|DRA000914|RAMPAGE|PRJDB5282|PRJNA4843412 |DRA013844|PRJNA597322|PRJNA615891|PRJNA548673|PRJNA401781
Protocol	CAGE|TSS-seq|RAMPAGE|C1CAGE|NETCAGE|STRIPE-seq|SLIC_CAGE |TIF-seq2|oligo_capping|ReCappable-seq
TSS cluster detected*	15

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2174393,EH38E1353612)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000606498.5:0 ENST00000488206.5:0 ENST00000371178.5:0 ENST00000496465.1:0 ENST00000371177.2:0 HQ447153:0 BC048995:0 BC029486:0 CU688668:0 GeneID: 83941 HGNC/MGI_ID: HGNC:24142 UniProt_ID: Q9BX74 U3KPW4 U3KQ44 U3KQS3 Nearer transcript ids and distances: AK311705:22 AK311444:23 ENST00000468586.5:25 ENST00000494926.5:42 ENST00000294613.9:-243 ENST00000371180.6:-243 AF353990:-243 view more...

Gene_name: TM2 domain containing 1 Gene_symbol: TM2D1 Gene_synonyms: BBP Gene_source: HGNC:24142

TATA-Box annotation

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Distance to TSS:	5
Nearest PromoterID:	NM_032027
Entrez ID:	83941
Nearest Unigene:	Hs.656790
Nearest Refseq:	NM_032027
Nearest Ensembl:	ENSG00000162604
Gene Name:	TM2 domain containing 1
Gene Alias:	BBP
Gene Type:	protein-coding
CpG%:	0.113636
GC%:	0.696629
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.