rfhg_76730.1

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Basic information about the TSS


TSS ID:rfhg_76730.1
TSS ID(Version3):hg_65269.1
Species:human
Chr:chr5
Start:179907792
End:179907911
Strand:-
Source datasetsFANTOM5|EPD|PRJDB5282|PRJNA597322|PRJNA401781|PRJNA615891
|PRJNA548673|PRJNA4843412|DRA013844
ProtocolCAGE|TSS_database|C1CAGE|STRIPE-seq|SLIC_CAGE
|ReCappable-seq|TIF-seq2|NETCAGE
TSS cluster detected*10

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3800996,EH38E2437229)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000356834.7:0
ENST00000355235.8:0
ENST00000522224.3:0
ENST00000630103.1:0
AB014576:0
BC129994:0
AB449893:0
AB463306:0
GeneID:23061
HGNC/MGI_ID:HGNC:29097
UniProt_ID:A1L3A9 B9A6K8 E5RIN2 Q66K14
Nearer transcript ids and distances:
    Gene_name:TBC1 domain family member 9B
    Gene_symbol:TBC1D9B
    Gene_synonyms:GRAMD9B KIAA0676
    Gene_source:HGNC:29097



    TATA-Box annotation


    Distance to TSS:46
    Nearest PromoterID:NM_198868
    Entrez ID:23061
    Nearest Unigene:Hs.155829
    Nearest Refseq:NM_015043
    Nearest Ensembl:ENSG00000197226
    Gene Name:TBC1 domain family member 9B
    Gene Alias:GRAMD9B
    Gene Type:protein-coding
    CpG%:0.184874
    GC%:0.783333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.