rfhg_77246.1

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Basic information about the TSS


TSS ID:rfhg_77246.1
Species:human
Chr:chr6
Start:3068373
End:3068387
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3805285,EH38E2440354)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001354934.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000259808.9:107
  • NM_001354930.2:107
  • NM_001354933.2:107
  • ENST00000676618.1:135
  • ENST00000678084.1:308
  • ENST00000677361.1:330
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:NM_001354934
Entrez ID:8737
Nearest Unigene:Hs.519842
Nearest Refseq:NM_003804
Nearest Ensembl:ENSG00000137275
Gene Name:
Gene Alias:IMD57|RIP|RIP-1|RIP1
Gene Type:protein-coding
CpG%:0.071429
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):