rfhg_78070.1

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Basic information about the TSS


TSS ID:rfhg_78070.1
TSS ID(Version3):hg_65867.1
hg_241560.1
Species:human
Chr:chr6
Start:12290251
End:12290526
Strand:+
Source datasetsFANTOM5|EPD|ENCODE|RAMPAGE|DRA013844|PRJDB5282|PRJNA4843412
|PRJNA548673|PRJNA615891
ProtocolCAGE|TSS_database|RAMPAGE|C1CAGE|NETCAGE|ReCappable-seq
|SLIC_CAGE
TSS cluster detected*10

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3813893,EH38E2446592)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000379375.6:0
S56805:0
AK307089:0
AK313914:0
AK291838:0
Y00749:0
AK226096:0
BC009720:0
GeneID:1906
HGNC/MGI_ID:HGNC:3176
UniProt_ID:Q6FH53
Nearer transcript ids and distances:
  • AB528710:104
  • DQ894155:104
  • DQ890981:104
  • CU679463:104
  • CR541903:104
view more...
Gene_name:endothelin 1
Gene_symbol:EDN1
Gene_synonyms:ET1
Gene_source:HGNC:3176



TATA-Box annotation


Distance to TSS:27
Nearest PromoterID:NM_001955
Entrez ID:1906
Nearest Unigene:Hs.511899
Nearest Refseq:NM_001955
Nearest Ensembl:ENSG00000078401
Gene Name:endothelin 1
Gene Alias:ARCND3|ET1|HDLCQ7|PPET1|QME
Gene Type:protein-coding
CpG%:0.065455
GC%:0.579710
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):76(CAATATAAAAAG,-,0.00),239(CCCGTTAAAAGG,-,0.00)



TSS expression

Expression data not found.