rfhg_80029.1

Basic information about the TSS

---

TSS ID: rfhg_80029.1 Species: human Chr: chr6		Start: 30061139 End: 30061189 Strand: -
Source datasets	PRJNA615891|PRJNA401781|PRJNA597322|PRJNA4843412|DRA013844 |PRJNA548673
Protocol	TIF-seq2|CAGE|STRIPE-seq|SLIC_CAGE|NETCAGE|RAMPAGE |oligo_capping|ReCappable-seq
TSS cluster detected*	10

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

---

Description:	PLS,CTCF-bound (EH38D3829887,EH38E2458068)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

---

Nearest transcript id and distance: ENST00000448093.5:0 ENST00000376797.7:0 ENST00000420251.5:0 ENST00000421692.5:0 ENST00000431012.5:0 BC067890:0 AK126001:0 AF032110:0 BX648746:0 GeneID: 80862 HGNC/MGI_ID: HGNC:13924 UniProt_ID: Q6ZU40 Nearer transcript ids and distances: AF032109:160 ENST00000425604.5:211 LY501613:-260 MA780501:-260 ENST00000437417.5:-451 AF238323:-451 L19693:-461 view more...

Gene_name: POLR1H antisense, pseudogene Gene_symbol: POLR1HASP Gene_synonyms: Em:AB023056.3 HCGVIII HCGVIII-1 HTEX4 Gene_source: HGNC:13924

TATA-Box annotation

---

Distance to TSS:	25
Nearest PromoterID:	NR_145416
Entrez ID:	80862
Nearest Unigene:	Hs.653168
Nearest Refseq:	NR_026751
Nearest Ensembl:	ENSG00000204623
Gene Name:	POLR1H antisense, pseudogene
Gene Alias:	C6orf12|HCG8|HCGVIII|HCGVIII-1|HTEX4|NCRNA00171|TCTEX4|ZNRD1-AS|ZNRD1-AS1|ZNRD1AS|ZNRD1AS1
Gene Type:	pseudo
CpG%:	0.100000
GC%:	0.470588
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.