rfhg_80991.1

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Basic information about the TSS


TSS ID:rfhg_80991.1
TSS ID(Version3):hg_67106.1
Species:human
Chr:chr6
Start:31959122
End:31959184
Strand:+
Source datasetsFANTOM5|DRA000914|DRA013844|PRJDB5282|PRJNA4843412
|PRJNA401781|PRJNA548673|PRJNA615891
ProtocolCAGE|C1CAGE|NETCAGE|RAMPAGE|ReCappable-seq|SLIC_CAGE
|oligo_capping|TIF-seq2
TSS cluster detected*12

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3831842,EH38E2459670)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000465703.5:0
ENST00000461073.5:0
ENST00000474839.5:0
ENST00000375394.7:0
AK297230:0
AK293881:0
Z48796:0
AB209605:0
AK303302:0
AK303448:0
AK299967:0
DQ892087:0
EU176680:0
GeneID:6499
HGNC/MGI_ID:HGNC:10898
UniProt_ID:A0A1U9X8J1 B4DF09 B4DM01 B4DSY1 B4E0B4 B4E0N1 F8WDE8 Q59F56
Nearer transcript ids and distances:
  • ENST00000488648.5:-5
  • ENST00000492900.1:7
  • BC015758:7
  • ENST00000628157.1:9
  • U09877:-42
view more...
Gene_name:SKI2 subunit of superkiller complex
Gene_symbol:SKIC2
Gene_synonyms:170A DDX13 HLP SKI2 SKI2W SKIV2L1
Gene_source:HGNC:10898



TATA-Box annotation


Distance to TSS:-22
Nearest PromoterID:NM_006929
Entrez ID:6499
Nearest Unigene:Hs.89864
Nearest Refseq:NM_006929
Nearest Ensembl:ENSG00000204351
Gene Name:SKI2 subunit of superkiller complex
Gene Alias:170A|DDX13|HLP|SKI2|SKI2W|SKIV2|SKIV2L1|THES2
Gene Type:protein-coding
CpG%:0.080645
GC%:0.682540
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.