rfhg_80992.1

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Basic information about the TSS


TSS ID:rfhg_80992.1
Species:human
Chr:chr6
Start:31959275
End:31959303
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000628157.1:-82
GeneID:6499
HGNC/MGI_ID:HGNC:10898
UniProt_ID:F8WDE8
Nearer transcript ids and distances:
  • ENST00000492900.1:-84
  • BC015758:-84
  • DQ892087:-91
  • EU176680:-91
  • ENST00000375394.7:-100
  • NM_006929.5:-100
  • AK299967:-100
  • ENST00000474839.5:-104
  • AK303448:-104
  • ENST00000461073.5:-118
  • AK303302:-118
  • AB209605:-127
  • ENST00000465703.5:-134
  • AK293881:-134
  • Z48796:-134
  • AK297230:-139
  • ENST00000488648.5:-158
  • U09877:-195
view more...
Gene_name:SKI2 subunit of superkiller complex
Gene_symbol:SKIC2
Gene_synonyms:170A DDX13 HLP SKI2 SKI2W SKIV2L1
Gene_source:HGNC:10898



TATA-Box annotation


Distance to TSS:114
Nearest PromoterID:NM_006929
Entrez ID:6499
Nearest Unigene:Hs.89864
Nearest Refseq:NM_006929
Nearest Ensembl:ENSG00000204351
Gene Name:SKI2 subunit of superkiller complex
Gene Alias:170A|DDX13|HLP|SKI2|SKI2W|SKIV2|SKIV2L1|THES2
Gene Type:protein-coding
CpG%:0.035714
GC%:0.517241
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "ENST00000492900.1:-84 BC015758:-84 DQ892087:-91 EU176680:-91 ENST00000375394.7:-100 NM_006929.5:-100 AK299967:-100 ENST00000474839.5:-104 AK303448:-104 ENST00000461073.5:-118 AK303302:-118 AB209605:-127 ENST00000465703.5:-134 AK293881:-134 Z48796:-134 AK297230:-139 ENST00000488648.5:-158 U09877:-195" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.