rfhg_81183.1

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Basic information about the TSS

TSS ID:rfhg_81183.1
Species:human
Chr:chr6
Start:32589788
End:32589827
Strand:-
Source datasetsPRJNA4843412
ProtocolNETCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:PLS (EH38D3832375,EH38E2460039)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:AK225690:0
AK291499:0
M33600:0
X03069:0
BC007920:0
AK225683:0
BC031023:0
BC008403:0
BC108922:0
AK289463:0
GeneID:3123 3126
HGNC/MGI_ID:HGNC:4948 HGNC:4952
UniProt_ID:A8K634 Q8NEI3
Nearer transcript ids and distances:
  • M26038:1
  • AB062112:2
  • BC033827:3
  • M20430:3
  • AK226058:6
  • L76133:6
  • U65585:6
  • M28583:7
  • AK291987:-9
  • LP895650:-9
  • M27635:9
  • M20504:11
  • M11867:17
  • AK293020:-19
  • BC171883:20
  • ENST00000360004.5:-21
  • NM_002124.4:-21
  • LP896422:-21
  • DQ284432:32
  • DQ284435:32
  • U95989:32
  • AJ697892:37
  • AJ697893:37
  • U84892:38
  • X99895:39
  • L02545:40
  • CU678949:44
  • HQ447185:44
  • CU689080:44
  • HQ447401:45
  • KJ891349:45
  • KJ901488:45
  • KJ901489:45
  • KJ901490:45
  • KJ905776:45
  • KJ905777:45
  • AB528619:45
  • AF291675:46
  • AJ297586:46
  • AY961068:46
  • AY961075:46
  • HG974573:46
  • HG974575:46
  • HG974603:46
  • HM067845:46
  • HM067846:46
  • M30179:46
  • EU375850:46
  • M11161:46
  • AJ297582:46
  • AJ297585:46
  • AJ297587:46
  • AJ302075:46
  • AY626551:46
  • AY770514:46
  • AY961062:46
  • AY961063:46
  • AY961064:46
  • AY961065:46
  • AY961066:46
  • AY961067:46
  • AY961069:46
  • AY961070:46
  • AY961071:46
  • AY961072:46
  • AY961073:46
  • AY961074:46
  • AY961076:46
  • AY961077:46
  • AY961078:46
  • DQ002917:46
  • DQ090958:46
  • GQ891551:46
  • HG974571:46
  • HG974572:46
  • HG974574:46
  • HG974576:46
  • HG974577:46
  • HG974578:46
  • HG974579:46
  • HG974580:46
  • HG974582:46
  • HG974583:46
  • HG974584:46
  • HG974585:46
  • HG974586:46
  • HG974587:46
  • HG974588:46
  • HG974589:46
  • HG974590:46
  • HG974591:46
  • HG974592:46
  • HG974595:46
  • HG974596:46
  • HG974597:46
  • HG974598:46
  • HG974599:46
  • HG974600:46
  • HG974601:46
  • HG974602:46
  • HG974604:46
  • HG974605:46
  • HM067843:46
  • HM067844:46
  • HM067847:46
  • HM067848:46
  • HM067849:46
  • HM067850:46
  • HM067852:46
  • HM067853:46
  • HM067854:46
  • HM067855:46
  • HM067856:46
  • HM067857:46
  • HM067858:46
  • HM067859:46
  • HM067860:46
  • HM067861:46
  • HM067862:46
  • HM067863:46
  • HM627215:46
  • LK391771:46
  • LK391772:46
  • LK391773:46
  • LK391774:46
  • LK391775:46
  • LK391776:46
  • LK391777:46
  • LK391778:46
  • LK391779:46
  • LK391780:46
  • LK391781:46
  • LK391782:46
  • LK391783:46
  • LK391784:46
  • LM611904:46
  • LM611905:46
  • LN623522:46
  • LN830949:46
  • LN854575:46
  • LN854576:46
  • MH049486:46
  • MK651797:46
  • KJ534866:46
  • AJ297583:46
  • AJ297584:46
  • AY935719:46
  • AF490771:65
  • M28584:75
  • M30180:75
  • X99896:91
  • D86415:112
  • U17381:119
  • U17379:119
  • U17380:121
  • M16957:133
  • M16959:133
  • M17378:133
  • AF010142:133
  • M16958:133
view more...
Gene_name:major histocompatibility complex, class II, DR beta 1; major histocompatibility complex, class II, DR beta 4
Gene_symbol:HLA-DRB1 HLA-DRB4
Gene_synonyms:
Gene_source:HGNC:4948 HGNC:4952



TATA-Box annotation

Distance to TSS:29
Nearest PromoterID:NM_001243965
Entrez ID:3123
Nearest Unigene:Hs.534322
Nearest Refseq:NM_002124
Nearest Ensembl:ENSG00000196126
Gene Name:major histocompatibility complex, class II, DR beta 1; major histocompatibility complex, class II, DR beta 4
Gene Alias:DRB1|HLA-DR1B|HLA-DRB|SS1
Gene Type:protein-coding
CpG%:0.000000
GC%:0.525000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "M26038:1 AB062112:2 BC033827:3 M20430:3 AK226058:6 L76133:6 U65585:6 M28583:7 AK291987:-9 LP895650:-9 M27635:9 M20504:11 M11867:17 AK293020:-19 BC171883:20 ENST00000360004.5:-21 NM_002124.4:-21 LP896422:-21 DQ284432:32 DQ284435:32 U95989:32 AJ697892:37 AJ697893:37 U84892:38 X99895:39 L02545:40 CU678949:44 HQ447185:44 CU689080:44 HQ447401:45 KJ891349:45 KJ901488:45 KJ901489:45 KJ901490:45 KJ905776:45 KJ905777:45 AB528619:45 AF291675:46 AJ297586:46 AY961068:46 AY961075:46 HG974573:46 HG974575:46 HG974603:46 HM067845:46 HM067846:46 M30179:46 EU375850:46 M11161:46 AJ297582:46 AJ297585:46 AJ297587:46 AJ302075:46 AY626551:46 AY770514:46 AY961062:46 AY961063:46 AY961064:46 AY961065:46 AY961066:46 AY961067:46 AY961069:46 AY961070:46 AY961071:46 AY961072:46 AY961073:46 AY961074:46 AY961076:46 AY961077:46 AY961078:46 DQ002917:46 DQ090958:46 GQ891551:46 HG974571:46 HG974572:46 HG974574:46 HG974576:46 HG974577:46 HG974578:46 HG974579:46 HG974580:46 HG974582:46 HG974583:46 HG974584:46 HG974585:46 HG974586:46 HG974587:46 HG974588:46 HG974589:46 HG974590:46 HG974591:46 HG974592:46 HG974595:46 HG974596:46 HG974597:46 HG974598:46 HG974599:46 HG974600:46 HG974601:46 HG974602:46 HG974604:46 HG974605:46 HM067843:46 HM067844:46 HM067847:46 HM067848:46 HM067849:46 HM067850:46 HM067852:46 HM067853:46 HM067854:46 HM067855:46 HM067856:46 HM067857:46 HM067858:46 HM067859:46 HM067860:46 HM067861:46 HM067862:46 HM067863:46 HM627215:46 LK391771:46 LK391772:46 LK391773:46 LK391774:46 LK391775:46 LK391776:46 LK391777:46 LK391778:46 LK391779:46 LK391780:46 LK391781:46 LK391782:46 LK391783:46 LK391784:46 LM611904:46 LM611905:46 LN623522:46 LN830949:46 LN854575:46 LN854576:46 MH049486:46 MK651797:46 KJ534866:46 AJ297583:46 AJ297584:46 AY935719:46 AF490771:65 M28584:75 M30180:75 X99896:91 D86415:112 U17381:119 U17379:119 U17380:121 M16957:133 M16959:133 M17378:133 AF010142:133 M16958:133" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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