rfhg_81479.1

Basic information about the TSS

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TSS ID: rfhg_81479.1 TSS ID(Version3): hg_67265.1 Species: human Chr: chr6		Start: 33272048 End: 33272130 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|RAMPAGE|PRJNA401781|PRJNA548673 |PRJNA615891|PRJNA597322|PRJNA4843412|DRA013844|PRJDB5282
Protocol	CAGE|TSS_database|RAMPAGE|oligo_capping|ReCappable-seq |TIF-seq2|STRIPE-seq|NETCAGE|SLIC_CAGE|C1CAGE
TSS cluster detected*	15

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3833016,EH38E2460504)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000474973.5:0 ENST00000439602.7:0 ENST00000474626.5:0 ENST00000476222.5:0 ENST00000496813.5:0 X69150:0 BC070230:0 AB055778:0 BC101786:0 BC101788:0 AY536376:0 GeneID: 6222 HGNC/MGI_ID: HGNC:10401 UniProt_ID: J3JS69 P62269 Nearer transcript ids and distances: ENST00000490191.5:2 BC106063:-26 AB590711:497 KJ892062:498 view more...

Gene_name: ribosomal protein S18 Gene_symbol: RPS18 Gene_synonyms: HKE3 KE-3 KE3 S18 Gene_source: HGNC:10401

TATA-Box annotation

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Distance to TSS:	14
Nearest PromoterID:	NM_022551
Entrez ID:	6222
Nearest Unigene:	Hs.448854
Nearest Refseq:	NM_022551
Nearest Ensembl:	ENSG00000231500
Gene Name:	ribosomal protein S18
Gene Alias:	D6S218E|HKE3|KE-3|KE3|S18
Gene Type:	protein-coding
CpG%:	0.073171
GC%:	0.542169
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.