rfhg_83008.1

Basic information about the TSS

TSS ID:	rfhg_83008.1
Species:	human
Chr:	chr6

Start:	44000570
End:	44000640
Strand:	+

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS (EH38D3844228,EH38E2469082)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000442114.6:0 ENST00000336600.6:0 ENST00000439969.2:0 ENST00000448947.2:0 BC029071:0 BC032706:0 GQ129376:0 GQ129377:0
GeneID:	221416
HGNC/MGI_ID:	HGNC:28692
UniProt_ID:
Nearer transcript ids and distances:	CU689494:356 DQ896658:356 KJ905649:356 EU176457:356 view more...

Gene_name:	long intergenic non-protein coding RNA 3040
Gene_symbol:	LINC03040
Gene_synonyms:	MGC45491
Gene_source:	HGNC:28692

TATA-Box annotation

Distance to TSS:	20
Nearest PromoterID:	NR_160954
Entrez ID:	221416
Nearest Unigene:	Hs.531926
Nearest Refseq:	NM_153246
Nearest Ensembl:	ENSG00000181577
Gene Name:	long intergenic non-protein coding RNA 3040
Gene Alias:	-
Gene Type:	ncRNA
CpG%:	0.014286
GC%:	0.549296
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.