rfhg_85488.1

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Basic information about the TSS


TSS ID:rfhg_85488.1
Species:human
Chr:chr6
Start:99424889
End:99424933
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3877308,EH38E2488102)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC029846:0
BC047485:0
GeneID:101927365
HGNC/MGI_ID:HGNC:40958
UniProt_ID:
Nearer transcript ids and distances:
  • NR_125843.1:-18
  • AK025621:28
view more...
Gene_name:PNISR antisense RNA 1
Gene_symbol:PNISR-AS1
Gene_synonyms:
Gene_source:HGNC:40958



TATA-Box annotation


Distance to TSS:40
Nearest PromoterID:NR_125843
Entrez ID:101927365
Nearest Unigene:Hs.535847
Nearest Refseq:NR_125843
Nearest Ensembl:
Gene Name:PNISR antisense RNA 1
Gene Alias:-
Gene Type:ncRNA
CpG%:0.113636
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.