rfhg_85621.1

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Basic information about the TSS


TSS ID:rfhg_85621.1
Species:human
Chr:chr6
Start:104941364
End:104941376
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3880321,EH38E2489629)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENST00000636951.1
Distance:-71
GeneID:100113403
HGNC/MGI_ID:HGNC:21553
UniProt_ID:
Gene_name:LIN28B-AS1
Gene_symbol:LIN28B-AS1
Gene_synonyms:dJ439I14.1
Gene_source:HGNC:21553



TATA-Box annotation


Distance to TSS:-843
Nearest PromoterID:NR_046407
Entrez ID:100113403
Nearest Unigene:Hs.649249
Nearest Refseq:NR_046407
Nearest Ensembl:ENSG00000203809
Gene Name:LIN28B-AS1
Gene Alias:C6orf220|LINC00577|dJ439I14.1
Gene Description:LIN28B antisense RNA 1
Gene Type:ncRNA
CpG%:0.083333
GC%:0.692308
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.