rfhg_86444.1

Basic information about the TSS

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TSS ID: rfhg_86444.1 Species: human Chr: chr6		Start: 116100814 End: 116100891 Strand: +
Source datasets	PRJNA4843412|DRA013844|PRJNA615891|PRJNA401781|PRJDB5282 |PRJNA548673
Protocol	NETCAGE|CAGE|SLIC_CAGE|TIF-seq2|oligo_capping|RAMPAGE|C1CAGE
TSS cluster detected*	9

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3889842,EH38E2496485)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000419791.3:0 ENST00000319550.9:0 AK308337:0 BC136832:0 BC136841:0 BC108699:0 AK290408:0 GeneID: 221294 HGNC/MGI_ID: HGNC:21556 UniProt_ID: A8K2Z3 Q5QPD0 Q5TFE4 Nearer transcript ids and distances:

Gene_name: 5'-nucleotidase domain containing 1 Gene_symbol: NT5DC1 Gene_synonyms: MGC24302 dJ486I3.1 Gene_source: HGNC:21556

TATA-Box annotation

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Distance to TSS:	-1
Nearest PromoterID:	NM_152729
Entrez ID:	221294
Nearest Unigene:	Hs.520341
Nearest Refseq:	NM_152729
Nearest Ensembl:	ENSG00000178425
Gene Name:	5'-nucleotidase domain containing 1
Gene Alias:	C6orf200|LP2642|NT5C2L1
Gene Type:	protein-coding
CpG%:	0.129870
GC%:	0.807692
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.