rfhg_86445.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_86445.1
Species:human
Chr:chr6
Start:116109643
End:116109643
Strand:+
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS (EH38D3889856,EH38E2496497)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK090918:125
GeneID:221294
HGNC/MGI_ID:HGNC:21556
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:5'-nucleotidase domain containing 1
    Gene_symbol:NT5DC1
    Gene_synonyms:MGC24302 dJ486I3.1
    Gene_source:HGNC:21556



    TATA-Box annotation


    Distance to TSS:8790
    Nearest PromoterID:NM_152729
    Entrez ID:221294
    Nearest Unigene:Hs.520341
    Nearest Refseq:NM_152729
    Nearest Ensembl:ENSG00000178425
    Gene Name:5'-nucleotidase domain containing 1
    Gene Alias:C6orf200|LP2642|NT5C2L1
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.000000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.