rfhg_86736.1

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Basic information about the TSS


TSS ID:rfhg_86736.1
TSS ID(Version3):hg_75362.1
hg_75363.1
Species:human
Chr:chr6
Start:122471751
End:122471853
Strand:-
Source datasetsFANTOM5|PRJNA548673|PRJDB5282|PRJNA4843412|DRA013844
|PRJNA401781|PRJNA615891|PRJNA597322
ProtocolCAGE|ReCappable-seq|C1CAGE|NETCAGE|RAMPAGE|SLIC_CAGE
|TIF-seq2|STRIPE-seq|oligo_capping
TSS cluster detected*12

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3894181,EH38E2499144)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000339697.5:0
BC033029:0
AL137261:0
BC028607:0
AY358429:0
AB033079:0
AK075339:0
AF164794:0
BC014412:0
GeneID:57515
HGNC/MGI_ID:HGNC:13464
UniProt_ID:Q9NRX5
Nearer transcript ids and distances:
  • HQ448235:14
  • JF432159:14
  • KJ899346:14
  • AB384156:14
  • KJ906278:14
  • CU689596:14
  • CU688532:14
  • AF087902:-28
view more...
Gene_name:serine incorporator 1
Gene_symbol:SERINC1
Gene_synonyms:KIAA1253 TDE1L TMS-2
Gene_source:HGNC:13464



TATA-Box annotation


Distance to TSS:5
Nearest PromoterID:NM_020755
Entrez ID:57515
Nearest Unigene:Hs.146668
Nearest Refseq:NM_020755
Nearest Ensembl:ENSG00000111897
Gene Name:serine incorporator 1
Gene Alias:TDE1L|TDE2|TMS-2|TMS2
Gene Type:protein-coding
CpG%:0.078431
GC%:0.533981
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.