rfhg_87366.1

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Basic information about the TSS


TSS ID:rfhg_87366.1
Species:human
Chr:chr6
Start:132733968
End:132733981
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3901876,EH38E2504106)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000544102.1:-352
GeneID:55350
HGNC/MGI_ID:HGNC:16431
UniProt_ID:H0YFQ7
Nearer transcript ids and distances:
    Gene_name:vanin 3, pseudogene
    Gene_symbol:VNN3P
    Gene_synonyms:HSA238982
    Gene_source:HGNC:16431



    TATA-Box annotation


    Distance to TSS:791
    Nearest PromoterID:NM_001368151
    Entrez ID:55350
    Nearest Unigene:Hs.183656
    Nearest Refseq:NM_018399
    Nearest Ensembl:
    Gene Name:vanin 3, pseudogene
    Gene Alias:HSA238982
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.571429
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.