rfhg_87368.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
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| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 79 |
|---|---|
| Nearest PromoterID: | NM_001368151 |
| Entrez ID: | 55350 |
| Nearest Unigene: | Hs.183656 |
| Nearest Refseq: | NM_018399 |
| Nearest Ensembl: | |
| Gene Name: | vanin 3, pseudogene |
| Gene Alias: | HSA238982 |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.210526 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AJ238982:-42 BC104416:-57 BC104417:-57 BC113022:-57 BC113023:-57 BC148317:-57 ENST00000414302.7:-61 AK075110:-69 ENST00000367927.9:-70 ENST00000425515.6:-70 ENST00000392393.7:-70 ENST00000674148.1:-70 ENST00000450865.2:-70 ENST00000448644.2:-70 NR_173394.1:-70 NR_173391.1:-70 NR_173395.1:-70 NR_173396.1:-70 NR_173393.1:-70 NR_173392.1:-70 AK314708:-70 ENST00000544102.1:344" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.