rfhg_87370.1
Basic information about the TSS
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Source datasets | FANTOM5|EPD | |||||||||||||
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Protocol | CAGE|TSS_database | |||||||||||||
TSS cluster detected* | 2 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | PLS,CTCF-bound (EH38D3901877,EH38E2504107) |
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Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 1 |
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Nearest PromoterID: | NM_001368151 |
Entrez ID: | 55350 |
Nearest Unigene: | Hs.183656 |
Nearest Refseq: | NM_018399 |
Nearest Ensembl: | |
Gene Name: | vanin 3, pseudogene |
Gene Alias: | HSA238982 |
Gene Type: | protein-coding |
CpG%: | 0.000000 |
GC%: | 0.214286 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "ENST00000414302.7:2 BC104416:6 BC104417:6 BC113022:6 BC113023:6 BC148317:6 AJ238982:21 ENST00000509351.5:66 ENST00000417437.6:66 ENST00000423615.6:66 ENST00000427187.6:66 ENST00000275223.7:66 ENST00000519686.6:66 AB435052:66 AB435053:66 AB435054:66 AB435055:66 AB435056:66 AB435057:66 AB435058:66 AB435059:66 AB435060:66 AB435061:66 ENST00000544102.1:425" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.