rfhg_8925.1
Basic information about the TSS
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| Source datasets | PRJNA401781|PRJNA548673|PRJNA615891|PRJNA4843412|DRA013844 | |||||||||||||
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| Protocol | CAGE|oligo_capping|ReCappable-seq|SLIC_CAGE|TIF-seq2|NETCAGE | |||||||||||||
| TSS cluster detected* | 8 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2194414,EH38E1365653) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -8 |
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| Nearest PromoterID: | NM_001349449 |
| Entrez ID: | 56267 |
| Nearest Unigene: | Hs.481898 |
| Nearest Refseq: | NM_001008661 |
| Nearest Ensembl: | ENSG00000137944 |
| Gene Name: | RBMX like 1; kynurenine aminotransferase 3 |
| Gene Alias: | CCBL2|KAT3|KATIII |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.520833 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AK315917:76 AK301326:86 ENST00000260508.9:104 ENST00000652648.1:104 NM_001008661.3:104 NM_001008662.3:104 NR_146184.2:104 NM_001162536.3:104 NM_019610.6:104 CR627392:111 BC012942:114 AL833593:129 ENST00000370486.1:-173 ENST00000399794.6:-180 NM_001349448.1:-180 NM_001349447.1:-180" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.