rfhg_91216.1

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Basic information about the TSS


TSS ID:rfhg_91216.1
TSS ID(Version3):hg_77140.1
Species:human
Chr:chr7
Start:6104884
End:6105005
Strand:+
Source datasetsFANTOM5|EPD|PRJNA548673|PRJNA615891|PRJNA4843412|DRA013844
|PRJDB5282
ProtocolCAGE|TSS_database|ReCappable-seq|SLIC_CAGE|NETCAGE|C1CAGE
TSS cluster detected*7

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000306177.9:0
ENST00000404008.6:0
ENST00000479544.6:0
ENST00000451154.5:0
ENST00000465073.6:0
AK298164:0
AK022759:0
BC060846:0
AY618868:0
AK309375:0
GeneID:84132
HGNC/MGI_ID:HGNC:20068
UniProt_ID:B4DP25 E7EWZ4 F8WD92 Q9H9J4
Nearer transcript ids and distances:
  • ENST00000521713.1:17
Gene_name:ubiquitin specific peptidase 42
Gene_symbol:USP42
Gene_synonyms:FLJ12697
Gene_source:HGNC:20068



TATA-Box annotation


Distance to TSS:-5
Nearest PromoterID:NM_001365764
Entrez ID:84132
Nearest Unigene:Hs.31856
Nearest Refseq:NM_032172
Nearest Ensembl:ENSG00000106346
Gene Name:ubiquitin specific peptidase 42
Gene Alias:-
Gene Type:protein-coding
CpG%:0.190083
GC%:0.844262
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.