rfhg_92502.1
Basic information about the TSS
|
| |||||||||||||
| Source datasets | FANTOM5 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | pELS (EH38D3956352,EH38E2541460) |
|---|---|
| Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 108 |
|---|---|
| Nearest PromoterID: | NR_157824 |
| Entrez ID: | 646588 |
| Nearest Unigene: | Hs.72068 |
| Nearest Refseq: | NR_157808 |
| Nearest Ensembl: | ENSG00000223561 |
| Gene Name: | long intergenic non-protein coding RNA 3007 |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.041667 |
| GC%: | 0.600000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AK057379:-9 ENST00000653704.1:40 ENST00000654115.1:-62 ENST00000662377.1:70 ENST00000652906.1:71 ENST00000656871.1:-80 ENST00000658568.1:-88 ENST00000664945.1:88 ENST00000652885.1:-96 ENST00000656897.1:-96 ENST00000661881.1:-96 NR_157829.1:-96 NR_157818.1:-96 NR_157824.1:-96 NR_157827.1:-96 NR_157831.1:-96 NR_157826.1:-96 NR_157830.1:-96 NR_157825.1:-96 NR_157828.1:-96 NR_157822.1:-96 NR_157819.1:-96 NR_157821.1:-96 NR_157820.1:-96 NR_157823.1:-96 ENST00000653559.1:-104 ENST00000670917.1:115 ENST00000423689.3:-128 ENST00000660499.1:-142 ENST00000661813.1:-238 ENST00000665149.1:-302" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.