rfhg_92729.1

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Basic information about the TSS


TSS ID:rfhg_92729.1
Species:human
Chr:chr7
Start:27156578
End:27156591
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3957942,EH38E2542629)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF362366:-7
MA597943:-7
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • BC140401:33
  • BC148692:33
  • AB463748:33
  • BC061916:-63
  • ENST00000242159.5:-84
  • NM_006896.4:-84
  • AF026397:-86
  • LF362365:115
  • MA597942:115
  • LF362367:-376
  • MA597944:-376
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:91
Nearest PromoterID:NM_006896
Entrez ID:3204
Nearest Unigene:Hs.660918
Nearest Refseq:NM_006896
Nearest Ensembl:ENSG00000122592
Gene Name:
Gene Alias:ANTP|HOX1|HOX1.1|HOX1A
Gene Type:protein-coding
CpG%:0.076923
GC%:0.428571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):