rfhg_93657.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_93657.1
Species:human
Chr:chr7
Start:38359121
End:38359136
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3968046,EH38E2549768)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000390346.2:-26
BC071739:-26
GeneID:6976
HGNC/MGI_ID:HGNC:12288
UniProt_ID:P03979
Nearer transcript ids and distances:
  • AK301059:39
  • Y00790:106
  • M13231:139
  • KJ901789:139
  • CU687152:139
  • M27336:142
  • S73842:424
  • S60175:424
view more...
Gene_name:T cell receptor gamma variable 3
Gene_symbol:TRGV3
Gene_synonyms:V1S3
Gene_source:HGNC:12288



TATA-Box annotation


Distance to TSS:17551
Nearest PromoterID:NR_040085
Entrez ID:100506776
Nearest Unigene:Hs.173034
Nearest Refseq:NR_040085
Nearest Ensembl:ENSG00000281103
Gene Name:T cell receptor gamma variable 3
Gene Alias:TCRGV
Gene Type:ncRNA
CpG%:0.000000
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.