rfhg_94029.1

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Basic information about the TSS


TSS ID:rfhg_94029.1
TSS ID(Version3):hg_78412.1
Species:human
Chr:chr7
Start:44200922
End:44201086
Strand:+
Source datasetsFANTOM5|EPD|DRA000914|ENCODE|PRJNA548673|PRJNA401781
|PRJNA615891|PRJNA4843412|DRA013844|PRJDB5282
ProtocolCAGE|TSS_database|SLIC_CAGE|NETCAGE|ReCappable-seq|C1CAGE
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3972970,EH38E2553040)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000679020.1:0
ENST00000678497.1:0
ENST00000496112.5:0
ENST00000447123.6:0
ENST00000678359.1:0
ENST00000677851.1:0
ENST00000679310.1:0
ENST00000679209.1:0
ENST00000478411.2:0
ENST00000223369.3:0
ENST00000677436.1:0
ENST00000677090.1:0
AK299158:0
AK312622:0
AK223488:0
BC007319:0
AF091079:0
U95735:0
GeneID:10652
HGNC/MGI_ID:HGNC:16959
UniProt_ID:A4D2J0 O15498 Q9UES0
Nearer transcript ids and distances:
  • DQ890653:48
  • DQ893833:48
  • CU675611:49
  • KJ893103:49
  • CR456989:50
  • AB451447:50
  • CR542008:50
  • AB451317:50
  • BT007078:50
view more...
Gene_name:YKT6 v-SNARE homolog
Gene_symbol:YKT6
Gene_synonyms:
Gene_source:HGNC:16959



TATA-Box annotation


Distance to TSS:26
Nearest PromoterID:NM_001363678
Entrez ID:10652
Nearest Unigene:Hs.520794
Nearest Refseq:NM_006555
Nearest Ensembl:ENSG00000106636
Gene Name:YKT6 v-SNARE homolog
Gene Alias:-
Gene Type:protein-coding
CpG%:0.103659
GC%:0.696970
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.