rfhg_94967.1
From referenceTSS
Basic information about the TSS
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| Source datasets | PRJNA548673|PRJNA615891|PRJNA597322|PRJNA401781|PRJDB5282 |PRJNA4843412|DRA013844 | |||||||||||||
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| Protocol | ReCappable-seq|CAGE|SLIC_CAGE|STRIPE-seq|RAMPAGE |oligo_capping|C1CAGE|NETCAGE | |||||||||||||
| TSS cluster detected* | 10 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D3983379,EH38E2559679) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -10 |
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| Nearest PromoterID: | NR_103527 |
| Entrez ID: | 441242 |
| Nearest Unigene: | Hs.373941 |
| Nearest Refseq: | NM_001013464 |
| Nearest Ensembl: | ENSG00000272693 |
| Gene Name: | long intergenic non-protein coding RNA 3006 |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.121212 |
| GC%: | 0.794118 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.