rfhg_95525.1

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Basic information about the TSS


TSS ID:rfhg_95525.1
Species:human
Chr:chr7
Start:75528066
End:75528131
Strand:-
Source datasetsPRJNA401781|PRJNA548673|PRJNA4843412|DRA013844
ProtocolCAGE|ReCappable-seq|NETCAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3990325,EH38E2564141)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000418756.5:0
ENST00000437568.6:0
BC046153:0
GeneID:5387
HGNC/MGI_ID:HGNC:9128
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000394921.8:15
  • BC029646:15
  • ENST00000422064.1:-17
  • BC014421:83
  • BC007683:111
  • ENST00000430602.5:230
  • BC022886:230
  • BC087844:349
  • ENST00000533167.5:487
  • BC101598:487
  • BC143635:487
view more...
Gene_name:PMS1 homolog 2, mismatch repair system component pseudogene 3
Gene_symbol:PMS2P3
Gene_synonyms:PMS5 PMSR3
Gene_source:HGNC:9128



TATA-Box annotation


Distance to TSS:25
Nearest PromoterID:NR_028059
Entrez ID:5387
Nearest Unigene:Hs.659871
Nearest Refseq:NM_005395
Nearest Ensembl:ENSG00000127957
Gene Name:PMS1 homolog 2, mismatch repair system component pseudogene 3
Gene Alias:PMS2L3|PMS2L9|PMS5|PMSR3
Gene Type:pseudo
CpG%:0.092308
GC%:0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.