rfhg_97178.1
From referenceTSS
Basic information about the TSS
|
| |||||||||||||||
Source datasets | FANTOM5|PRJDB5282|PRJNA4843412|DRA013844 | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Protocol | CAGE|C1CAGE|NETCAGE | |||||||||||||||
TSS cluster detected* | 4 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | PLS,CTCF-bound (EH38D4007213,EH38E2574827) |
---|---|
Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | -85 |
---|---|
Nearest PromoterID: | NM_001190996 |
Entrez ID: | 10552 |
Nearest Unigene: | Hs.124126 |
Nearest Refseq: | NM_006409 |
Nearest Ensembl: | ENSG00000241685 |
Gene Name: | |
Gene Alias: | Arc40|HEL-68|HEL-S-307|SOP2Hs|SOP2L |
Gene Type: | protein-coding |
CpG%: | 0.096154 |
GC%: | 0.679245 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |