rfhg_97400.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D4008016,EH38E2575480) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 61 |
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| Nearest PromoterID: | NR_028038 |
| Entrez ID: | 352954 |
| Nearest Unigene: | Hs.556063 |
| Nearest Refseq: | NM_178831 |
| Nearest Ensembl: | ENSG00000239521 |
| Gene Name: | CASTOR family member 3, pseudogene |
| Gene Alias: | GATS|STAG3OS |
| Gene Type: | protein-coding |
| CpG%: | 0.100000 |
| GC%: | 0.727273 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AK290510:-3 ENST00000454084.5:-38 NR_166147.1:-56 NR_028038.2:-56 BC044886:-56 ENST00000328453.9:-57 BC090867:-58 ENST00000543273.5:-59 ENST00000435519.6:-65 ENST00000414739.3:-65 BC033723:-65 BC053367:-65 ENST00000649671.1:-69 NR_028039.1:-83 NR_028040.1:-83 AK092358:149 AK290237:151 AK290039:151 ENST00000647868.1:156 CR749506:156 KJ904229:156" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.