rfhg_97567.1

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Basic information about the TSS


TSS ID:rfhg_97567.1
TSS ID(Version3):hg_85240.1
Species:human
Chr:chr7
Start:100656371
End:100656461
Strand:-
Source datasetsFANTOM5|EPD|PRJNA4843412|PRJNA548673
ProtocolCAGE|TSS_database|NETCAGE|ReCappable-seq
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4008414,EH38E2575809)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000160382.10:0
ENST00000485601.5:0
ENST00000461605.1:0
BC008582:0
BC020944:0
AB015906:0
AF041475:0
AK314940:0
GeneID:51412
HGNC/MGI_ID:HGNC:160
UniProt_ID:C9JQT4 O94805
Nearer transcript ids and distances:
  • ENST00000487225.5:5
  • HQ447891:17
  • KJ893908:17
  • AB527576:17
  • CU676776:17
view more...
Gene_name:actin like 6B
Gene_symbol:ACTL6B
Gene_synonyms:BAF53B SMARCN2
Gene_source:HGNC:160



TATA-Box annotation


Distance to TSS:32
Nearest PromoterID:NM_016188
Entrez ID:51412
Nearest Unigene:Hs.259831
Nearest Refseq:NM_016188
Nearest Ensembl:ENSG00000077080
Gene Name:actin like 6B
Gene Alias:ACTL6|BAF53B|arpNalpha
Gene Type:protein-coding
CpG%:0.122222
GC%:0.747253
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.