rfhg_97603.1

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Basic information about the TSS


TSS ID:rfhg_97603.1
Species:human
Chr:chr7
Start:100852594
End:100852646
Strand:-
Source datasetsPRJDB5282|PRJNA4843412|DRA013844
ProtocolC1CAGE|NETCAGE|CAGE
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4008619,EH38E2575961)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000412754.1:0
GeneID:105375430
HGNC/MGI_ID:HGNC:40807
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:SLC12A9 antisense RNA 1
    Gene_symbol:SLC12A9-AS1
    Gene_synonyms:RP11-126L15.4
    Gene_source:HGNC:40807



    TATA-Box annotation


    Distance to TSS:-6
    Nearest PromoterID:NR_146550
    Entrez ID:105375430
    Nearest Unigene:Hs.638778
    Nearest Refseq:NR_146550
    Nearest Ensembl:ENSG00000236305
    Gene Name:SLC12A9 antisense RNA 1
    Gene Alias:-
    Gene Type:ncRNA
    CpG%:0.076923
    GC%:0.698113
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.