rfhg_98012.1

Basic information about the TSS

TSS ID:	rfhg_98012.1
Species:	human
Chr:	chr7

Start:	102572548
End:	102572556
Strand:	-

Source datasets

DRA000914

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000508848.5:0 ENST00000508910.5:0
GeneID:	548644
HGNC/MGI_ID:	HGNC:33853
UniProt_ID:	A0A0B4J2F8
Nearer transcript ids and distances:	ENST00000464525.5:-4 ENST00000504157.5:-4 ENST00000379340.9:9 ENST00000489144.5:-11 AF468111:-11 ENST00000613744.4:-24 ENST00000504101.1:-24 BC156863:26 AB384935:26 ENST00000506060.5:27 ENST00000507355.5:-27 ENST00000608621.5:-27 ENST00000511313.5:-27 ENST00000621093.4:27 ENST00000443430.2:-27 ENST00000513438.1:-27 NR_173351.1:-27 NM_001097615.3:-27 AJ277740:27 AJ277739:27 AJ277741:27 ENST00000502415.5:78 ENST00000486319.5:-93 ENST00000513506.6:-97 view more...

Gene_name:	RNA polymerase II subunit J3
Gene_symbol:	POLR2J3
Gene_synonyms:
Gene_source:	HGNC:33853

TATA-Box annotation

Distance to TSS:	69
Nearest PromoterID:	NM_001097615
Entrez ID:	548644
Nearest Unigene:	Hs.610255
Nearest Refseq:	NM_001015884
Nearest Ensembl:	ENSG00000168255
Gene Name:	RNA polymerase II subunit J3
Gene Alias:	POLR2J2\|RPB11b1\|RPB11b2
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.555556
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "ENST00000464525.5:-4 ENST00000504157.5:-4 ENST00000379340.9:9 ENST00000489144.5:-11 AF468111:-11 ENST00000613744.4:-24 ENST00000504101.1:-24 BC156863:26 AB384935:26 ENST00000506060.5:27 ENST00000507355.5:-27 ENST00000608621.5:-27 ENST00000511313.5:-27 ENST00000621093.4:27 ENST00000443430.2:-27 ENST00000513438.1:-27 NR_173351.1:-27 NM_001097615.3:-27 AJ277740:27 AJ277739:27 AJ277741:27 ENST00000502415.5:78 ENST00000486319.5:-93 ENST00000513506.6:-97" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.