rfhg_98170.1

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Basic information about the TSS


TSS ID:rfhg_98170.1
Species:human
Chr:chr7
Start:105013025
End:105013068
Strand:-
Source datasetsPRJNA4843412|DRA013844|PRJNA401781|PRJNA615891|PRJNA548673
ProtocolNETCAGE|CAGE|SLIC_CAGE|RAMPAGE|oligo_capping|ReCappable-seq
TSS cluster detected*8

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4011911,EH38E2578328)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000450686.1:0
ENST00000655204.1:0
AK124046:0
GeneID:100216545
HGNC/MGI_ID:HGNC:40845 HGNC:48961
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000445184.1:1
  • LF357777:-47
  • MA593354:-47
  • LF357776:300
  • MA593353:300
  • LF357778:-405
  • MA593355:-405
view more...
Gene_name:KMT2E antisense RNA 1; long intergenic non-protein coding RNA 1004
Gene_symbol:KMT2E-AS1 LINC01004
Gene_synonyms:LOC100216545
Gene_source:HGNC:40845 HGNC:48961



TATA-Box annotation


Distance to TSS:1095
Nearest PromoterID:NR_024586
Entrez ID:100216545
Nearest Unigene:Hs.631150
Nearest Refseq:NR_024586
Nearest Ensembl:
Gene Name:KMT2E antisense RNA 1; long intergenic non-protein coding RNA 1004
Gene Alias:-
Gene Type:ncRNA
CpG%:0.023256
GC%:0.568182
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.