rfhg_9836.1

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Basic information about the TSS


TSS ID:rfhg_9836.1
Species:human
Chr:chr1
Start:98210339
End:98210351
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D2201939,EH38E1370748)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK090562:360
GeneID:729987
HGNC/MGI_ID:HGNC:52566
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000418344.1:396
Gene_name:long intergenic non-protein coding RNA 1776
Gene_symbol:LINC01776
Gene_synonyms:
Gene_source:HGNC:52566



TATA-Box annotation


Distance to TSS:-366
Nearest PromoterID:NR_046088
Entrez ID:729987
Nearest Unigene:Hs.683961
Nearest Refseq:NR_046088
Nearest Ensembl:ENSG00000226053
Gene Name:long intergenic non-protein coding RNA 1776
Gene Alias:-
Gene Type:ncRNA
CpG%:0.083333
GC%:0.615385
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.