rfhg_99683.1

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Basic information about the TSS


TSS ID:rfhg_99683.1
Species:human
Chr:chr7
Start:128672309
End:128672317
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000477515.3:-10
GeneID:346653
HGNC/MGI_ID:HGNC:27998
UniProt_ID:C9K0C0
Nearer transcript ids and distances:
  • ENST00000684742.1:-13
  • BC047310:-15
  • ENST00000641987.1:-16
  • BC105729:-16
  • BC105730:-16
  • BC105731:-16
  • ENST00000641888.1:-17
  • ENST00000641605.1:-17
  • ENST00000682356.1:-17
  • NM_001128926.4:-17
  • NM_001012454.6:-17
  • NM_001290255.2:-17
  • NM_001290254.2:-17
  • BC066973:-17
  • ENST00000641443.1:-21
  • ENST00000682361.1:-26
  • ENST00000684498.1:-28
  • ENST00000683523.1:-53
  • KJ896110:81
view more...
Gene_name:golgi associated RAB2 interactor 1A
Gene_symbol:GARIN1A
Gene_synonyms:GARI
Gene_source:HGNC:27998



TATA-Box annotation


Distance to TSS:21
Nearest PromoterID:NM_001290255
Entrez ID:346653
Nearest Unigene:Hs.445236
Nearest Refseq:NM_001012454
Nearest Ensembl:ENSG00000205085
Gene Name:golgi associated RAB2 interactor 1A
Gene Alias:FAM137B
Gene Type:protein-coding
CpG%:0.000000
GC%:0.777778
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "ENST00000684742.1:-13 BC047310:-15 ENST00000641987.1:-16 BC105729:-16 BC105730:-16 BC105731:-16 ENST00000641888.1:-17 ENST00000641605.1:-17 ENST00000682356.1:-17 NM_001128926.4:-17 NM_001012454.6:-17 NM_001290255.2:-17 NM_001290254.2:-17 BC066973:-17 ENST00000641443.1:-21 ENST00000682361.1:-26 ENST00000684498.1:-28 ENST00000683523.1:-53 KJ896110:81" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.