rfmm_100038.1

Basic information about the TSS

TSS ID:	rfmm_100038.1
Species:	mouse
Chr:	chr10

Start:	115423645
End:	115423673
Strand:	-

Source datasets

FANTOM5|EPD|DRA000914

Protocol

CAGE|TSS_database|CAGE_and_CAGEscan

TSS cluster detected^*

3

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2342091,EM10E0964639)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000105272.8:0 ENSMUST00000149008.2:0 ENSMUST00000129309.2:0 AK047873:0 AK134981:0
GeneID:	14160
HGNC/MGI_ID:	MGI:1341817
UniProt_ID:	Q8C8A7
Nearer transcript ids and distances:	ENSMUST00000020350.15:-12 NM_010195.2:-12 AK132387:-12 BC156649:243 ENSMUST00000172806.8:247 ENSMUST00000173740.2:247 AF110818:247 view more...

Gene_name:	leucine rich repeat containing G protein coupled receptor 5
Gene_symbol:	Lgr5
Gene_synonyms:	Gpr49
Gene_source:	MGI:1341817

TATA-Box annotation

Distance to TSS:	26
Nearest PromoterID:	NM_010195.2
Entrez ID:	Lgr5
Nearest Unigene:	NM_010195
Nearest Refseq:
Nearest Ensembl:
Gene Name:	leucine rich repeat containing G protein coupled receptor 5
Gene Alias:
Gene Type:
CpG%:	0.035714
GC%:	0.620690
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.