rfmm_100119.1
Basic information about the TSS
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| Source datasets | GSE117655|DRA000914|PRJDB10397 | |||||||||||||
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| Protocol | deepCAGE|CAGE_and_CAGEscan|C1CAGE | |||||||||||||
| TSS cluster detected* | 3 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
| Description: | pELS,CTCF-bound (EM10D2342382,EM10E0964734) |
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| Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 15 |
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| Nearest PromoterID: | XM_030245299.2 |
| Entrez ID: | Cnot2 |
| Nearest Unigene: | XM_030245297 |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | |
| Gene Alias: | |
| Gene Type: | |
| CpG%: | 0.180000 |
| GC%: | 0.803922 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "ENSMUST00000168036.8:314 ENSMUST00000169921.8:314 ENSMUST00000020374.6:314 NM_001359249.1:314 NM_001359251.1:314 NM_001359563.1:314 NM_001359247.1:314 NM_001037846.3:314 NM_028082.2:314 NM_001037847.2:314 NM_001037848.3:314 BC065171:314 ENSMUST00000167706.8:323 ENSMUST00000105265.8:324 AK011231:324 ENSMUST00000105267.8:325 AK078121:325 ENSMUST00000169576.8:329 ENSMUST00000165527.8:329 BC063105:329 AK172132:329 ENSMUST00000171214.8:332 AK202363:333 ENSMUST00000171944.8:334 ENSMUST00000164383.8:335 AK167834:338 ENSMUST00000166166.8:340 ENSMUST00000169937.8:342 ENSMUST00000167644.2:342 BC043133:342 AK149767:344 ENSMUST00000169507.8:360 ENSMUST00000218744.2:397" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.