rfmm_100242.1

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Basic information about the TSS


TSS ID:rfmm_100242.1
TSS ID(Version3):mm_162907.1
mm_93647.1
Species:mouse
Chr:chr10
Start:117196895
End:117197020
Strand:-
Source datasetsFANTOM5|DRA000914
ProtocolCAGE|CAGE_and_CAGEscan
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK212530:-11
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000176480.8:46
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:15921
Nearest PromoterID:NM_001310609.1
Entrez ID:Cpsf6
Nearest Unigene:XM_030245172
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.024000
GC%:0.674603
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):