rfmm_100258.1

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Basic information about the TSS


TSS ID:rfmm_100258.1
Species:mouse
Chr:chr10
Start:117526441
End:117526460
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF224640:36
MA460217:36
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF224641:-156
  • MA460218:-156
  • LF224639:173
  • MA460216:173
  • LF224642:-213
  • MA460219:-213
  • DQ344919:222
  • LF224638:378
  • MA460215:378
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:11014
Nearest PromoterID:XM_017313822.2
Entrez ID:Mdm2
Nearest Unigene:NM_001288586
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.105263
GC%:0.700000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):