rfmm_1003.1

Basic information about the TSS

TSS ID:	rfmm_1003.1
Species:	mouse
Chr:	chr1

Start:	36730612
End:	36730635
Strand:	+

Source datasets

PRJDB10397|GSE117655|DRA000914

Protocol

C1CAGE|deepCAGE|CAGE_and_CAGEscan

TSS cluster detected^*

3

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2267914,EM10E0934060)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	BC099474:4
GeneID:	12859
HGNC/MGI_ID:	MGI:88475
UniProt_ID:
Nearer transcript ids and distances:	AK135174:5 AK008339:13 AK131673:13 X53157:21 BC096048:26 NM_009942.2:-44 ENSMUST00000193210.6:-47 ENSMUST00000195151.6:56 ENSMUST00000191790.6:74 ENSMUST00000081180.7:-82 ENSMUST00000192859.2:88 ENSMUST00000193235.2:90 view more...

Gene_name:	cytochrome c oxidase subunit 5B
Gene_symbol:	Cox5b
Gene_synonyms:
Gene_source:	MGI:88475

TATA-Box annotation

Distance to TSS:	55
Nearest PromoterID:	NM_009942.2
Entrez ID:	Cox5b
Nearest Unigene:	NM_009942
Nearest Refseq:
Nearest Ensembl:
Gene Name:	cytochrome c oxidase subunit 5B
Gene Alias:
Gene Type:
CpG%:	0.043478
GC%:	0.625000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.