rfmm_100325.1

Basic information about the TSS

TSS ID:	rfmm_100325.1
Species:	mouse
Chr:	chr10

Start:	117977437
End:	117977438
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF198246:253 MA433823:253
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	NM_001162905.1:254 NM_010785.2:254 NM_148922.3:254 NM_001162904.1:254 ENSMUST00000219827.2:278 ENSMUST00000020437.13:299 AK011769:299 AK004789:299 BC052680:316 ENSMUST00000163238.9:326 BC137608:326 BC144777:326 ENSMUST00000219087.2:381 ENSMUST00000218011.2:391 ENSMUST00000164077.9:391 M20824:391 M20823:391 ENSMUST00000169817.3:412 EU490427:412 EU490428:412 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-9
Nearest PromoterID:	XM_006513305.4
Entrez ID:	Mdm1
Nearest Unigene:	XM_030244934
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

Property "Nearest transcripts" (as page type) with input value "NM_001162905.1:254 NM_010785.2:254 NM_148922.3:254 NM_001162904.1:254 ENSMUST00000219827.2:278 ENSMUST00000020437.13:299 AK011769:299 AK004789:299 BC052680:316 ENSMUST00000163238.9:326 BC137608:326 BC144777:326 ENSMUST00000219087.2:381 ENSMUST00000218011.2:391 ENSMUST00000164077.9:391 M20824:391 M20823:391 ENSMUST00000169817.3:412 EU490427:412 EU490428:412" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.