rfmm_100327.1

Basic information about the TSS

TSS ID:	rfmm_100327.1
Species:	mouse
Chr:	chr10

Start:	117977466
End:	117977470
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF198246:221 MA433823:221
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	NM_001162905.1:222 NM_010785.2:222 NM_148922.3:222 NM_001162904.1:222 ENSMUST00000219827.2:246 ENSMUST00000020437.13:267 AK011769:267 AK004789:267 BC052680:284 ENSMUST00000163238.9:294 BC137608:294 BC144777:294 ENSMUST00000219087.2:349 ENSMUST00000218011.2:359 ENSMUST00000164077.9:359 M20824:359 M20823:359 ENSMUST00000169817.3:380 EU490427:380 EU490428:380 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	22
Nearest PromoterID:	XM_006513305.4
Entrez ID:	Mdm1
Nearest Unigene:	XM_030244934
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	0.400000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

Property "Nearest transcripts" (as page type) with input value "NM_001162905.1:222 NM_010785.2:222 NM_148922.3:222 NM_001162904.1:222 ENSMUST00000219827.2:246 ENSMUST00000020437.13:267 AK011769:267 AK004789:267 BC052680:284 ENSMUST00000163238.9:294 BC137608:294 BC144777:294 ENSMUST00000219087.2:349 ENSMUST00000218011.2:359 ENSMUST00000164077.9:359 M20824:359 M20823:359 ENSMUST00000169817.3:380 EU490427:380 EU490428:380" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.