rfmm_100423.1

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Basic information about the TSS


TSS ID:rfmm_100423.1
Species:mouse
Chr:chr10
Start:120006238
End:120006248
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2344339,EM10E0965524)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF198255:-3
MA433832:-3
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000140237.8:-35
  • LF224801:-464
  • MA460378:-464
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-4028
Nearest PromoterID:XR_001779654.3
Entrez ID:Gm34545
Nearest Unigene:XR_380868
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.272727
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):