rfmm_100469.1

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Basic information about the TSS


TSS ID:rfmm_100469.1
Species:mouse
Chr:chr10
Start:120312824
End:120312841
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2344505,EM10E0965621)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF204670:0
MA440247:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000072777.14:450
  • ENSMUST00000159699.2:450
  • NM_001347170.1:450
  • NM_010441.3:450
  • BC052158:450
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-458
Nearest PromoterID:NM_001347170.1
Entrez ID:Hmga2
Nearest Unigene:NM_010441
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.444444
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):