rfmm_100495.1

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Basic information about the TSS


TSS ID:rfmm_100495.1
Species:mouse
Chr:chr10
Start:120734895
End:120734916
Strand:-
Source datasetsFANTOM5|DRA000914
ProtocolCAGE|CAGE_and_CAGEscan
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2344750,EM10E0965736)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_177092.4:19
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AK137163:53
  • AK086975:53
  • ENSMUST00000092143.12:-90
  • BC096447:138
  • LF202981:-340
  • MA438558:-340
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:11
Nearest PromoterID:XM_006513766.4
Entrez ID:Msrb3
Nearest Unigene:XM_006513766
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.047619
GC%:0.545455
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):