rfmm_100503.1

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Basic information about the TSS


TSS ID:rfmm_100503.1
Species:mouse
Chr:chr10
Start:120815312
End:120815330
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2344791,EM10E0965750)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-66
    Nearest PromoterID:XR_380414.5
    Entrez ID:Lemd3
    Nearest Unigene:XR_001779544
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:
    CpG%:0.166667
    GC%:0.789474
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):