rfmm_10052.1

Basic information about the TSS

TSS ID:	rfmm_10052.1
Species:	mouse
Chr:	chr1

Start:	179631420
End:	179631457
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2304512,EM10E0949209)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	NM_026375.2:-123
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENSMUST00000027768.14:175 AB059278:195 BC138343:197 BC138344:197 ENSMUST00000147137.2:249 LF220279:275 MA455856:275 LF220278:333 MA455855:333 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	142
Nearest PromoterID:	NM_026375.2
Entrez ID:	Ahctf1
Nearest Unigene:	NM_026375
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:	0.054054
GC%:	0.526316
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):